|How to begin?|
|Identification of driver genes|
|Exploration of molecular landscapes|
|Using Venn diagrams|
|Using stand-alone software|
Potentially, you can obtain much more useful output by running the perl script NEA.pl off-line.
NEA.pl is the script that executes network enrichment analysis at this web site.
Please note that while running analysis online, on this web-site, you can both look up the command line and download specific input and output files.
Watch the text and links that appear after the current analysis finished.
You can to use them either as a reference or as input to a modified analysis off-line. _tmpAGS, _tmpFGS, and _tmpNET contain your submitted gene list(s), the collection of functional gene sets, and the network.